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Publications

We believe that the role of science in improving the quality of life of all societies must be facilitated through collaboration between researchers and shared knowledge. The primary goal of our Centre is to help the scientific community achieve the research goals, but also disseminate knowledge in the form of public outreach.ÌýThe diverse and complementary expertise of our members promotes microbiome research across many scientific domains. Check out some examples by exploring the left menu.

2024

Primary research contributions

1.ÌýPidgeon Mitchell S, Shamash M, Suleiman L, Dridi L, Maurice CF, Castagner B. The dietary ellagitannin metabolite urolithin A is produced by a molybdenum-dependent dehydroxylase encoded by prevalent human gut Enterocloster spp. In review at Nature Communications, and on Biorxiv:

2. Vigano M, Kubal S, Lu Y, Habib S, Samarani S, Cama G, Viau C, Farzin H, Koudieh N, Xia J, Ahmad A, Vigano A, Costiniuk CT. Impact of Cannabidiol and Exercise on Clinical Outcomes and Gut Microbiota for Chemotherapy-Induced Peripheral Neuropathy in Cancer Survivors: A Case Report .Pharmaceuticals (Basel). 2024 Jun 25;17(7):834. doi: 10.3390/ph17070834.PMID: 39065685.

3. Logel M, El-Zein M, Franco EL, Gonzalez E.J. Species-level characterization of the cervicovaginal microbiota and its role in human papillomavirus-associated cervical carcinogenesis. Med Virol. 2024 Jun;96(6):e29764. doi: 10.1002/jmv.29764.PMID: 38923577.

4. Bogza A, King IL, Maurice CF. Worming into infancy: Exploring helminth-microbiome interactions in early life. Cell Host Microbe. 2024 May 8;32(5):639-650. doi:10.1016/j.chom.2024.04.009.PMID: 38723604.

5. Ding W, Chen L, Xia J, Dong G, Song B, Pei B, Li X. Causal relationships between gut microbiome and digestive system diseases: A two-sample Mendelian randomization study. Medicine (Baltimore). 2024 Apr 26;103(17):e37735. doi: 10.1097/MD.0000000000037735.PMID: 38669367.

6. Ajeeb TT, Gonzalez E, Solomons NW, Vossenaar M, Koski KG. Human milk microbiome: associations with maternal diet and infant growth. Front Nutr. 2024 Mar 11;11:1341777. doi: 10.3389/fnut.2024.1341777. eCollection 2024.PMID: 38529196.

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Conferences and medias appearances

1. The Tribune, July 31st,2023, Dr. Jesse Shapiro, 0

2. Futurity, September 5th, 2023, Dr. Jesse Shapiro,

3. Podcast interview - This Week in Virology, November 1st, 2023, Dr. Corinne Maurice and Dr. Jesse Shapiro,

4. Youtube interview, Discussing species concepts, November 30th, 2023, Dr. Jesse Shapiro,

5. Moteur de recherche, March 2024, Using worms to protect against intestinal diseases, Dr. Corinne Maurice,

6. The Centre has co-hosted a one-day seminar with the AMR Centre on February 8th, 2024. Keynote speaker: Dr. Gautam Dantas from Washington University in St. Louis, Title: Understanding, Predicting, and Remediating Perturbations to Diverse Microbiomes.

2023

Primary research contributions

1.ÌýLu Y, Zhou G, Ewald J, Pang Z, Shiri T, Xia J. ÌýNucleic Acids Res. 2023 May 11:gkad407. doi: 10.1093/nar/gkad407. Online ahead of print.PMID: 37166960.

2.ÌýStockdale SR, Hill C. . Curr Opin Microbiol. 2023 Mar 30;73:102307. doi: 10.1016/j.mib.2023.102307. Online ahead of print.PMID: 37002975 Free article. Review.

3.ÌýMadi N, Chen D, Wolff R, Shapiro BJ, Garud NR. Elife. 2023 Feb 9;12:e78530. doi: 10.7554/eLife.78530.PMID: 36757364 Free PMC article.

4.ÌýDridi L, Altamura F, Gonzalez E, Lui O, Kubinski R, Pidgeon R, Montagut A, Chong J, Xia J, Maurice CF, Castagner B.Ìý Nat Commun. 2023 Feb 7;14(1):662. doi: 10.1038/s41467-023-36365-8.PMID: 36750571 Free PMC article.

5.ÌýLui O, Dridi L, Gonzalez E, Yasmine S, Kubinski R, Billings H, Bohlmann J, Withers SG, Maurice C, Castagner B. ACS Chem Biol. 2023 Feb 17;18(2):356-366. doi: 10.1021/acschembio.2c00791. Epub 2023 Feb 2.PMID: 36728836 Free article.

6.ÌýMinerbi A, Gonzalez E, Brereton N, Fitzcharles MA, Chevalier S, Shir Y. Pain. 2023 Feb 1;164(2):e66-e76. doi: 10.1097/j.pain.0000000000002694. Epub 2022 May 19.PMID: 35587528.

7.ÌýMajumder S, Sackey T, Viau C, Park S, Xia J, Ronholm J, George S. Genomic and phenotypic profiling of Staphylococcus aureus isolates from bovine mastitis for antibiotic resistance and intestinal infectivity. BMC Microbiol. 2023 Feb 20;23(1):43. Doi: 10.1186/s12866-023-02785-1.

8.ÌýSutcliffe SG, Reyes A, Maurice CF. iScience. 2023 Jan 18;26(2):106007. doi: 10.1016/j.isci.2023.106007. eCollection 2023 Feb 17.PMID: 36798434 Free PMC article.

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Conferences and medias appearances

1. º£½ÇÉçÇø Health Centre Foundation Event, Supporting microbiome research at º£½ÇÉçÇø, Dr. I. King, 2023.

2.ÌýiHeartRadio.ca, CJAD800 – Health Matters with Tara Schwartz, The gut microbiome: a new treatment for chronic pain syndrome, Dr. I. King, 2023.

2022

Primary research contributions

1.ÌýHajjar R, Gonzalez E, Fragoso G, Oliero M, Alaoui AA, Calvé A, Vennin Rendos H, Djediai S, Cuisiniere T, Laplante P, Gerkins C, Ajayi AS, Diop K, Taleb N, Thérien S, Schampaert F, Alratrout H, Dagbert F, Loungnarath R, Sebajang H, Schwenter F, Wassef R, Ratelle R, Debroux E, Cailhier JF, Routy B, Annabi B, Brereton NJB, Richard C, Santos MM. Gut. 2023 Jun;72(6):1143-1154. doi: 10.1136/gutjnl-2022-328389. Epub 2022 Dec 30.PMID: 36585238.

2.ÌýAjeeb TT, Gonzalez E, Solomons NW, Koski KG. Front Microbiol. 2022 Nov 16;13:908845. doi: 10.3389/fmicb.2022.908845. eCollection 2022.PMID: 36466698 Free PMC article.

3.ÌýLopez Leyva L, Gonzalez E, Solomons NW, Koski KG. Front Microbiol. 2022 Sep 8;13:885588. doi: 10.3389/fmicb.2022.885588. eCollection 2022.PMID: 36160202 Free PMC article.

4.ÌýSinha A, Li Y, Mirzaei MK, Shamash M, Samadfam R, King IL, Maurice CF. Microbiome. 2022 Jul 8;10(1):105. doi: 10.1186/s40168-022-01275-2.PMID: 35799219 Free PMC article.

5.ÌýShkoporov AN, Turkington CJ, Hill C. Nat Rev Microbiol. 2022 Dec;20(12):737-749. doi: 10.1038/s41579-022-00755-4. Epub 2022 Jun 30.PMID: 35773472 Review.

6.ÌýKlassen L, Reintjes G, Li M, Jin L, Amundsen C, Xing X, Dridi L, Castagner B, Alexander TW, Abbott DW. Front Microbiol. 2023 Mar 3;13:1020250. doi: 10.3389/fmicb.2022.1020250. eCollection 2022.PMID: 36938132 Free PMC article. Review.

7.ÌýShamash M, Maurice CF. ISME J. 2022 Feb;16(2):323-330. doi: 10.1038/s41396-021-01090-x. Epub 2021 Aug 20.PMID: 34417565 Free PMC article. Review. No abstract available.

8.ÌýGalipeau HJ, Verdu EF. Mucosal Immunol. 2022 Feb;15(2):235-243. doi: 10.1038/s41385-021-00479-3. Epub 2022 Jan 14.PMID: 35031683 Free article. Review.

9.ÌýShimbori C, De Palma G, Baerg L, Lu J, Verdu EF, Reed DE, Vanner S, Collins SM, Bercik P. Gut Microbes. 2022 Jan-Dec;14(1):2105095. doi: 10.1080/19490976.2022.2105095.PMID: 35905313 Free PMC article.

10.ÌýJin Z, Ng A, Maurice CF, Juncker D. Gut Microbes. 2022 Jan-Dec;14(1):2096993. doi: 10.1080/19490976.2022.2096993.PMID: 35844189 Free PMC article.

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Conferences and medias appearances

1. Radboud University Seminar Series, Is natural IL-17 production during early life a harbinger of intestinal resilience? Invited speaker, Dr. I King, Nov 2022.

2.ÌýUniversity of Liege Seminar Series, Is natural IL-17 production during early life a harbinger of intestinal resilience? Invited speaker, Dr. I King, Nov 2022.

3.Ìý7th Annual International Conference on Modulating the Environment with Microbes, Indian Network for Soil Contamination Research (INSCR). Using bacteriophages to modulate the gut microbiome, invited speaker (virtual), Dr. C. Maurice, November 2022.

4.ÌýInstitut Pasteur, France. Looking for Darwin's footprints in bacterial pangenomes, invited speaker, Dr. B. Jesse Shapiro, October 6, 2022.

5.ÌýSummer School 2022: Phage Canada 2022 Virtual Symposia. SEA-PHAGES at º£½ÇÉçÇø, invited speaker, Dr. C. Maurice, August 2022.

6.ÌýISME 18, 18th International Symposium on Microbial Ecology, Lausanne, Switzerland. From early life to adulthood, contrasting interactions of phages and bacteria in the human gut. Co-session chair of Microbial ecology of viruses and phages, invited speaker, Dr. C. Maurice, August 2022

7.Ìý89eme Congres de l’Acfas, Université Laval, Quebec, Canada. Bacteriophages intestinaux et sante humaine: un couteau a double tranchant. Invited speaker, Dr. C. Maurice, May 2022.

8.ÌýNational Public Radio and Undark by Emily Laber-Warren, Scientists explore why some people are able to live with an infection unscathed, Dr. I. King, 2022.

9.ÌýHealth Matters Podcast with Tara Schwartz in cooperation with the º£½ÇÉçÇø Health Centre (March 30, 2022), Dr. Irah King interview: Gut Health and the º£½ÇÉçÇø Centre for Microbiome Research.

2021

Primary research contributions

1.ÌýLu Y, Chong J, Shen S, Chammas JB, Chalifour L, Xia J. Metabolites. 2021 Dec 23;12(1):10. doi: 10.3390/metabo12010010.PMID: 35050132 Free PMC article.

2.ÌýBilal M, Achard C, Barbe F, Chevaux E, Ronholm J, Zhao X. Microorganisms. 2021 Sep 7;9(9):1899. doi: 10.3390/microorganisms9091899.PMID: 34576794 Free PMC article.

3.ÌýGraef FA, Celiberto LS, Allaire JM, Kuan MTY, Bosman ES, Crowley SM, Yang H, Chan JH, Stahl M, Yu H, Quin C, Gibson DL, Verdu EF, Jacobson K, Vallance BA. PLoS Pathog. 2021 Aug 5;17(8):e1009719. doi: 10.1371/journal.ppat.1009719. eCollection 2021 Aug.PMID: 34352037 Free PMC article.

4.ÌýN'Guessan A, Brito IL, Serohijos AWR, Shapiro BJ. Genome Biol Evol. 2021 Aug 3;13(8):evab142. doi: 10.1093/gbe/evab142.PMID: 34132784 Free PMC article.

5.ÌýLevin D, De Palma G, Zou H, Bazzaz AHZ, Verdu E, Baker B, Pinto-Sanchez MI, Khalidi N, Larché MJ, Beattie KA, Bercik P. J Scleroderma Relat Disord. 2021 Oct;6(3):290-298. doi: 10.1177/23971983211032808. Epub 2021 Jul 24.PMID: 35382497 Free PMC article.

6.ÌýKaro-Atar D, Khan N, Divangahi M, King IL. PLoS Pathog. 2021 Jul 15;17(7):e1009690. doi: 10.1371/journal.ppat.1009690. eCollection 2021 Jul.PMID: 34265025 Free PMC article. Review. No abstract available.

7.ÌýHill C. Ann Nutr Metab. 2021 May 26:1-6. doi: 10.1159/000516399. Online ahead of print.PMID: 34038906 Free article.

8.ÌýHaçariz O, Viau C, Karimian F, Xia J. BMC Genomics. 2021 May 19;22(1):364. doi: 10.1186/s12864-021-07695-y.PMID: 34011272 Free PMC article.

9.ÌýLopez Leyva L, Gonzalez E, Li C, Ajeeb T, Solomons NW, Agellon LB, Scott ME, Koski KG. Curr Dev Nutr. 2021 Apr 15;5(4):nzab013. doi: 10.1093/cdn/nzab013. eCollection 2021 Apr.PMID: 33898919 Free PMC article.

10.ÌýSutcliffe SG, Shamash M, Hynes AP, Maurice CF. ÌýViruses. 2021 Mar 11;13(3):455. doi: 10.3390/v13030455.PMID: 33799646 Free PMC article.

11.ÌýMcHugh AJ, Yap M, Crispie F, Feehily C, Hill C, Cotter PD. NPJ Sci Food. 2021 Feb 15;5(1):4. doi: 10.1038/s41538-021-00087-2.PMID: 33589631 Free PMC article.

12.ÌýGonzalez E, Brereton NJB, Li C, Lopez Leyva L, Solomons NW, Agellon LB, Scott ME, Koski KG. Front Microbiol. 2021 Feb 12;12:557180. doi: 10.3389/fmicb.2021.557180. eCollection 2021.PMID: 33643228 Free PMC article.

13.ÌýDohlman AB, Arguijo Mendoza D, Ding S, Gao M, Dressman H, Iliev ID, Lipkin SM, Shen X. Cell Host Microbe. 2021 Feb 10;29(2):281-298.e5. doi: 10.1016/j.chom.2020.12.001. Epub 2021 Jan 6.PMID: 33382980 Free PMC article.

14.ÌýTaguer M, Shapiro BJ, Maurice CF.ÌýGut Microbes. 2021 Jan-Dec;13(1):1-15. doi: 10.1080/19490976.2021.1903289.PMID: 33779505 Free PMC article.

2020

Primary research contributions

1.ÌýFiers WD, Leonardi I, Iliev ID. Annu Rev Nutr. 2020 Sep 23;40:323-343. doi: 10.1146/annurev-nutr-013120-043659. Epub 2020 Jul 17.PMID: 32680437 Free PMC article.

2.ÌýGuerin E, Hill C. ÌýFront Cell Infect Microbiol. 2020 Sep 10;10:481. doi: 10.3389/fcimb.2020.00481. eCollection 2020.PMID: 33014897 Free PMC article. Review.

3.ÌýAltamura F, Maurice CF, Castagner B. Curr Opin Chem Biol. 2020 Jun;56:10-15. doi: 10.1016/j.cbpa.2019.09.005. Epub 2019 Nov 1.PMID: 31678829 Review.

4.ÌýLiu X, Teixeira JS, Ner S, Ma KV, Petronella N, Banerjee S, Ronholm J. Front Microbiol. 2020 Apr 17;11:696. doi: 10.3389/fmicb.2020.00696. eCollection 2020.PMID: 32362885 Free PMC article.

5.ÌýRenteria AE, Maniakas A, Mfuna LE, Asmar MH, Gonzalez E, Desrosiers M. Int Forum Allergy Rhinol. 2021 Feb;11(2):93-105. doi: 10.1002/alr.22653. Epub 2020 Jul 26.PMID: 32713109 Clinical Trial.

6.ÌýVerdu EF, Schuppan D. Nat Struct Mol Biol. 2020 Jan;27(1):5-7. doi: 10.1038/s41594-019-0360-5.PMID: 31873302 No abstract available.

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Conferences and medias appearances

1.ÌýThe Influence of Gut Virome and the Immune System on Intestinal Health – Webinar sponsored by Charles River Laboratory. King IL, Maurice CF, December 10, 2020.Ìý

2.ÌýScientists Explore Why Some People Are Able To Live With An Infection Unscathed – by Undark, a nonprofit, editorially independent digital magazine. King IL, August 29, 2020.Ìý

3.ÌýFour reasons to come to terms with viruses – by Radio-Canada. Maurice CF, Shapiro J, May 16th, 2020.Ìý

4. Tracking down the pandemic in the sewers: Update with Alexandre Touchette – by Radio-Canada. King IL, April 12, 2020.Ìý

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To learn more about the microbiome research worldwide, click on the following links.

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